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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900640.1_cds_XP_016450645.1_45074
CDS Infomation

[gene=LOC107775430] [db_xref=GeneID:107775430] [protein=protein STRICTOSIDINE SYNTHASE-LIKE 5-like] [protein_id=XP_016450645.1] [location=join(87313..87456,87906..88118,88263..88330,88929..89165,89368..89500,89584..89862)] [gbkey=CDS]
Sequence

ATGGATTCCATGCTGTTTTTTTCAAGCTTTTTAGTAGTTATTTTGCTGGCTATTTCACTC
CAAGTTTTTTTCTTCTCACCAATATCCCCTGAGATTCTTGAAATTCCTTCTGCCGCTACA
TTTACATCAAAGAGCTATTTGCAGAGGGTAAGTAAACTTGGAGAAGGGTTTCTGGATAGA
CCAGAAGATGTGGCAGTGGACAAAATGGGAGTTTTATATACAGCAACTAGAGATGGTTGG
ATCAAAAGATTGCACAAGAATGGGACTTGGGAGAGTTGGAAGTATATTGGGAGTAATTCT
TTACTAGGACTTATAGTATCAGCTGCTGGTCATGTCATCGTATGTGACGCTGAAGAGGGG
TTGCTTAAGGTTAGTGAAGATGGCGTAAGTGTTCTTGCTTCACACGTCAATGGTGAAAAA
ATAAGATTTGCAGATGATGTGGTGGAAGCATCAGATGGGAGTCTATACTTCAGTGTCCCA
AGCACCAAATTTGGACTCCACGAATGGTACCTTGACGTGCTTGAGGCCAAGCCCCATGGT
CAGCTTCTCAAATATAATCCTTCATTGAACAAGACCTCTGTAATTCTTCATGACTTGGCC
TTTGCAAATGGCGTTGCTCTCTCTGCGGATCAAGATTACTTAATTGTCTGTGAAACGTGG
AAATTTAGGTGCCTAAAGTATTGGCTGAAGGAGGAAATCAAAGGACAAACAGAGATCTTC
GTCGATAATCTTACTGGTTTACCCGACAACATCAAGCTTGCTCCAGATGGTTCGTTCTGG
ATAGCTCTAGTAGAGTTTACAGCTCGTAGACTAAATTTTGTACACTCGTCAAGAGCTTCA
AAACATTTGCTGGCAACTTTCCCCAAATTGATGAACTGGGTCCTTGGAGCATACCACAAA
GCTATGGTAGTGAATGTCGCAGCTGATGGGAAGATAATCAAAGGCTTTGATGATCCAACT
GGAAAGGTCATGTCATTTGTGACATCTGTGCTGGAGTATGAAGGTCATCTATATTTGGGA
AGTCTCAACTGTGACTTCATAGGAAAGTTACCACTGACGACCTCAACTGTGTAG

Peptide Sequence

PEP ID

XP_016450645.1
PEP Infomation

PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Nicotiana tabacum]
Sequence

MDSMLFFSSFLVVILLAISLQVFFFSPISPEILEIPSAATFTSKSYLQRVSKLGEGFLDR
PEDVAVDKMGVLYTATRDGWIKRLHKNGTWESWKYIGSNSLLGLIVSAAGHVIVCDAEEG
LLKVSEDGVSVLASHVNGEKIRFADDVVEASDGSLYFSVPSTKFGLHEWYLDVLEAKPHG
QLLKYNPSLNKTSVILHDLAFANGVALSADQDYLIVCETWKFRCLKYWLKEEIKGQTEIF
VDNLTGLPDNIKLAPDGSFWIALVEFTARRLNFVHSSRASKHLLATFPKLMNWVLGAYHK
AMVVNVAADGKIIKGFDDPTGKVMSFVTSVLEYEGHLYLGSLNCDFIGKLPLTTSTV

Transcript Sequence

Gene sequence data has not been registered.